prof. RNDr. Jiří Šponer, DrSc.

2006

• Trapped water molecules are essential to structural dynamics and function of a ribozyme

  RHODES Maria REBLOVA Kamila NILS Walter SPONER Jiri

  Article in Periodical

  The Proceedings of the National Academy of Sciences, year: 2006, volume: 103, edition: 36

2005

• Elbow-like motions in Ribosomal Kink-turns: The role of the second A-minor motif and Nominally unpaired bases

  RÁZGA Filip KOČA Jaroslav LEONTIS Neocles B. ŠPONER Jiří

  Article in Proceedings

  Journal Of Biomolecular Structure and Dynamics, year: 2005

• Hinge-Like Motions in RNA Kink-Turns: The Role of the Second A-minor Motif and Nominally Unpaired Bases

  RÁZGA Filip KOČA Jaroslav ŠPONER Jiří LEONTIS Neocles B.

  Article in Periodical

  Biophysical Journal, year: 2005, volume: 88, edition: 5

• Influence of Ion Parameters On Molecular Dynamics and/or Free Energy Calculation

  FADRNÁ Eva KOČA Jaroslav ŠPONER Jiří

  Article in Proceedings

  Workshop on Modelling interactions in Biomolecules II, year: 2005

• Non-Watson-Crick base pairing in RNA. Quantum chemical analysis of the cis Watson-Crick/sugar edge base pair family

  ŠPONER Judit E ŠPAČKOVÁ Naděžda KULHÁNEK Petr LESZCZYNSKI Jerzy ŠPONER Jiří

  Article in Periodical

  JOURNAL OF PHYSICAL CHEMISTRY A, year: 2005, volume: 109, edition: 10

• Ribosomal RNA Kink-turn motif - a flexible molecular hinge

  RÁZGA Filip ŠPAČKOVÁ Naděžda RÉBLOVÁ Kamila KOČA Jaroslav LEONTIS Neocles B. ŠPONER Jiří

  Article in Proceedings

  Materials Structure in chemistry, biology, physics and technology, year: 2005

• RNA Kink-Turns as Flexible Molecular Elbows Relevant to Ribosome Function

  RÁZGA Filip ZACHARIAS Martin RÉBLOVÁ Kamila KOČA Jaroslav ŠPONER Jiří

  Article in Proceedings

  Strukturní biofyzika makromolekul, year: 2005

• RNA Kink-turns as Flexible Molecular Hinges of the Ribosomal "LEGO". The Role of Second A-minor Motif and Nominally Unpaired Bases

  RÁZGA Filip KOČA Jaroslav LEONTIS N.B. ŠPONER Jiří

  Article in Proceedings

  14th Conference on Current Trends in Computational Chemistry 2005, year: 2005

• RNA K-turns-Flexible Ribosomal Motifs:Dynamics, Hydration, Conformations and Biological Relevance

  RÁZGA Filip KOČA Jaroslav LEONTIS Neocles B ŠPONER Jiří

  Article in Proceedings

  Workshop on Modeling Interactions in Biomolecules II, year: 2005

2004

• Long-residency hydration, cation binding and dynamics of Loop E/Helix IV rRNA - L25 protein complex

  RÉBLOVÁ Kamila SPACKOVÁ Nadezda KOČA Jaroslav LEONTIS Neocles SPONER Jiri

  Article in Periodical

  Biophysical Journal, year: 2004, volume: 87, edition: 5