prof. RNDr. Jiří Šponer, DrSc.
Professor, National Centre for Biomolecular Research
correspondence Address:
Kotlářská 267/2, 611 37 Brno
e‑mail: |
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Total number of publications: 210
2015
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RADIKÁLOVÁ SYNTÉZA NUKLEOVÝCH BÁZÍ Z FORMAMIDU V IMPAKTNÍM PLAZMATU
CHEMICKÉ LISTY, year: 2015, volume: 109, edition: 6
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Reactive Conformation of the Active Site in the Hairpin Ribozyme Achieved by Molecular Dynamics Simulations with epsilon/zeta Force Field Reparametrizations
Journal of Physical Chemistry B, year: 2015, volume: 119, edition: 11, DOI
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Refinement of the Sugar-Phosphate Backbone Torsion Beta for AMBER Force Fields Improves the Description of Z- and B-DNA
Journal of Chemical Theory and Computation, year: 2015, volume: 11, edition: 12, DOI
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Stacked and H-Bonded Cytosine Dimers. Analysis of the Intermolecular Interaction Energies by Parallel Quantum Chemistry and Polarizable Molecular Mechanics.
Journal of Physical Chemistry B, year: 2015, volume: 119, edition: 30, DOI
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Tetraloop-like Geometries Could Form the Basis of the Catalytic Activity of the Most Ancient Ribooligonucleotides
Chemistry - A European Journal, year: 2015, volume: 21, edition: 9, DOI
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The role of an active site Mg2+ in HDV ribozyme self-cleavage: Insights from QM/MM calculations
Physical Chemistry Chemical Physics, year: 2015, volume: 17, edition: 1, DOI
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Towards biochemically relevant QM computations on nucleic acids: controlled electronic structure geometry optimization of nucleic acid structural motifs using penalty restraint functions
Physical Chemistry Chemical Physics, year: 2015, volume: 17, edition: 2, DOI
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Untemplated Nonenzymatic Polymerization of 3 ',5 ' cGMP: A Plausible Route to 3 ',5 '-Linked Oligonucleotides in Primordia
Journal of Physical Chemistry B, year: 2015, volume: 119, edition: 7, DOI
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Wobble pairs of the HDV ribozyme play specific roles in stabilization of active site dynamics
Physical Chemistry Chemical Physics, year: 2015, volume: 17, edition: 8, DOI
2014
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Are Waters around RNA More than Just a Solvent? - An Insight from Molecular Dynamics Simulations
Journal of Chemical Theory and Computation, year: 2014, volume: 10, edition: 1, DOI